Bioinformatics Programmer Analyst II - Gynecologic Cancer Center for Excellence

Join the HJF Team!

HJF is seeking a Bioinformatics Programmer Analyst II to analyze, design, develop, modify, test, and implement software tools and scripts to support analysis of bioinformatic data. Reviews user needs and requests and to develop bioinformatic pipelines supporting primary analysis of clinical, proteomeand genome data. Participates in the development of and ensures adherence to project schedules. Develops custom scripts and applications, test applications, create software patches, and perform routine maintenance.

This position will be in support of Gynecologic Cancer-Center of Excellence (GYN-COE) located at the Women's Health Integrated Research Center (WHIRC) in Annandale, Virginia.

The Henry M. Jackson Foundation for the Advancement of Military Medicine (HJF) is a nonprofit organization dedicated to advancing military medicine. We serve military, medical, academic and government clients by administering, managing and supporting preeminent scientific programs that benefit members of the armed forces and civilians alike.Since its founding in 1983, HJF has served as a vital link between the military medical community and its federal and private partners. HJF's support and administrative capabilities allow military medical researchers and clinicians to maintain their scientific focus and accomplish their research goals.

• Analyze, design, develop, modify, test, and implement software tools and scripts to support bioinformatic analysis of multi-omic data including clinical, proteome and genome data levels.
• Creates detailed test cases and document all programming and systems changes to include flowcharts, layouts, diagrams, charts, code comments, and revision dates.
• Uses a variety of technologies, including scripting languages, proprietary and open source software development tools and various data management platforms to create applications, utilities and integrations to help automate research data processing and analysis.
• Evaluate and configure systems and peripherals for performance and serviceability, reliability, availability, and performs operational requirement studies within a system environment context. Recommends enhancements or changes to the system configuration to maintain optimum system performance and utility.
• Arranges project requirements in programming sequence by analyzing requirements; prepares a workflow chart and diagram using knowledge of computer capabilities, subject matter, programming language, and logic.
• Works with senior scientists, data analysts and Information Technology (IT) personnel to determine and design the best technical solutions.
• May perform other duties and responsibilities as assigned or directed by the supervisor. This may include attendance of and participation in required training for role.

Education and Experience

• Bachelor's Degree in Computer Science, Computational Biology, Bioinformatics, or related field.
• Minimum of 3-5 years experience required

Required Knowledge, Skills and Abilities

• Working knowledge of bioinformatics tools and software including R, MATLAB, Perl and Python. Experience with R Shiny desired, but not required.
• Demonstrated expertise in bioinformatic data analysis that ideally includes co-authored scientific publications and conference abstracts.
• Experience with one or more web client technologies, e.g. JSP, HTML, CSS, JavaScript, AJAX, jQuery, and ExtJS.
• Experience with relational database application development and Structured Query Language (SQL, MySQL, etc.) skills.
• Strong analytical and problem-solving skills and the desire to learn new technologies.
• Strong Java object-oriented design and coding skills with Java-based server technologies.
• Excellent communications skills and the ability to work effectively in the scientific research domain.

Physical Capabilities

• Ability to stand or sit at a computer for prolonged periods.

Work Environment

• This position will take place primarily in an office setting.

Compensation

• The annual salary range for this position is $64,200-$80,000. Actual salary will be determined based on experience, education, etc.

Benefits

• HJF offers a comprehensive suite of benefits focused on your health and well-being, from medical, dental, and vision coverage to health savings and retirement plans, and more.

Employment with HJF is contingent upon successful completion of a background check, which may include, but is not limited to, contacting your professional references, verification of previous employment, education and credentials, a criminal background check, and a department of motor vehicle (DMV) check if applicable. Any qualifications to be considered as equivalents, in lieu of stated minimums, require the prior approval of the Chief Human Resources Officer.

Equal Opportunity Employer/Protected Veterans/Individuals with Disabilities

The contractor will not discharge or in any other manner discriminate against employees or applicants because they have inquired about, discussed, or disclosed their own pay or the pay of another employee or applicant. However, employees who have access to the compensation information of other employees or applicants as a part of their essential job functions cannot disclose the pay of other employees or applicants to individuals who do not otherwise have access to compensation information, unless the disclosure is (a) in response to a formal complaint or charge, (b) in furtherance of an investigation, proceeding, hearing, or action, including an investigation conducted by the employer, or (c) consistent with the contractor's legal duty to furnish information. 41 CFR 60-1.35(c)

Any qualifications to be considered as equivalents, in lieu of stated minimums, require the prior approval of the Chief Human Resources Officer.